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61135-33-9

  • Product Name:5-ETHYNYL-2'-DEOXYURIDINE
  • Molecular Formula:C11H12N2O5
  • Purity:99%
  • Molecular Weight:252.227
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Product Details;

CasNo: 61135-33-9

Molecular Formula: C11H12N2O5

Good Producer Pharmaceutical Intermediates Best Price 5-ETHYNYL-2'-DEOXYURIDINE 61135-33-9

  • Molecular Formula:C11H12N2O5
  • Molecular Weight:252.227
  • Melting Point:199°C(lit.) 
  • Refractive Index:1.644 
  • PKA:8.29±0.10(Predicted) 
  • PSA:104.55000 
  • Density:1.55 g/cm3 
  • LogP:-1.84140 

5-ETHYNYL-2'-DEOXYURIDINE(Cas 61135-33-9) Usage

Description

5-Ethynyl-2′-deoxyuridine (61135-33-9) is a novel agent for fast and sensitive detection of DNA synthesis?in vivo.1 5-EdU is incorporated into proliferating cells followed by detection with a fluorescent azide using click ligation.1 In contrast to the use of BrdU, the new method does not require sample fixation or DNA denaturation. 5-Ethynyl-2′-deoxyuridine may be used for studying cell proliferation in the central nervous system and may be combined with BrdU staining in a novel protocol allowing for double labeling of DNA synthesis.2

Uses

5-Ethynyl-2’deoxyuridine is a extensively used nucleoside analog used as a probe for DNA synthesis. However, 5-Ethynyl-2’deoxyuridine is a toxic anti-metabolite, which potentially causes DNA instabi liy, necrosis and cell-cycle arrest, therefore it is often used for short-term DNA synthesis in tissue culture and living organisms where prolonged cell survival is not required.

InChI:InChI=1/C11H12N2O5/c1-2-6-4-13(11(17)12-10(6)16)9-3-7(15)8(5-14)18-9/h1,4,7-9,14-15H,3,5H2,(H,12,16,17)/t7-,8+,9+/m0/s1

61135-33-9 Relevant articles

Phosphorylated 5-ethynyl-2′-deoxyuridine for advanced DNA labeling

Seo, Siyoong,Onizuka, Kazumitsu,Nishioka, Chieko,Takahashi, Eiki,Tsuneda, Satoshi,Abe, Hiroshi,Ito, Yoshihiro

, p. 4589 - 4595 (2015)

The representative DNA-labeling agent 5-...

Turning Off Transcription with Bacterial RNA Polymerase through CuAAC Click Reactions of DNA Containing 5-Ethynyluracil

Slaví?ková, Michaela,Janou?ková, Martina,?imonová, Anna,Cahová, Hana,Kambová, Milada,?anderová, Hana,Krásny, Libor,Hocek, Michal

, p. 8311 - 8314 (2018)

Copper(I)-catalyzed azide–alkyne cycload...

Synthesis of tricarbonyl rhenium and technetium complexes of a 5′-carboxamide 5-ethyl-2′-deoxyuridine for selective inhibition of herpes simplex virus thymidine kinase 1

Desbouis,Schubiger,Schibli

, p. 1340 - 1347 (2007)

Herpes simplex virus thymidine kinase ty...

5-Alkynyl analogs of arabinouridine and 2′-deoxyuridine: Cytostatic activity against herpes simplex virus and varicella-zoster thymidine kinase gene-transfected cells

Cristofoli, Walter A.,Wiebe, Leonard I.,De Clercq, Erik,Andrei, Graciela,Snoeck, Robert,Balzarini, Jan,Knaus, Edward E.

, p. 2851 - 2857 (2007)

A group of arabinouridines (TMSEAU, EAU,...

Tropolone-Conjugated DNA: Fluorescence Enhancement in the Duplex

Bollu, Amarnath,Sharma, Nagendra K.

, p. 1467 - 1475 (2019)

Tropolone (2-hydroxycyclohepta-2,4,6-tri...

Intermolecular hydrogen-bond interaction to promote thermoreversible 2'-deoxyuridine-based AIE-organogels

Zhao, Xuan,Zhao, Long,Xiao, Qiuyun,Xiong, Hai

supporting information, p. 1363 - 1367 (2020/10/27)

Fluorescent supramolecular nucleoside-ba...

Thermodynamic Reaction Control of Nucleoside Phosphorolysis

Kaspar, Felix,Giessmann, Robert T.,Neubauer, Peter,Wagner, Anke,Gimpel, Matthias

supporting information, p. 867 - 876 (2020/01/24)

Nucleoside analogs represent a class of ...

Direct incorporation and extension of a fluorescent nucleotide through rolling circle DNA amplification for the detection of microRNA 24-3P

Le, Binh Huy,Seo, Young Jun

supporting information, p. 2035 - 2038 (2018/05/04)

We designed and synthesized several fluo...

61135-33-9 Process route

5-ethynyltrimethylsilyl-3',5'-di-O-p-toluyl-2'-deoxyuridine
77875-91-3

5-ethynyltrimethylsilyl-3',5'-di-O-p-toluyl-2'-deoxyuridine

2'-deoxy-5-ethynyluridine
61135-33-9

2'-deoxy-5-ethynyluridine

Conditions
Conditions Yield
With sodium methylate; In methanol;
With sodium methylate; In methanol; at 25 ℃; for 6h; Yield given;
With sodium methylate; In methanol; at 20 ℃;
Multi-step reaction with 2 steps
1: 87 percent / potassium fluoride; tetraethylammonium bromide / acetonitrile / 12 h / Heating
2: 79 percent / sodium methylate / methanol / 4 h / 60 °C
With potassium fluoride; tetraethylammonium bromide; sodium methylate; In methanol; acetonitrile;
5-(1-chlorovinyl)-2'-deoxy-3',5'-di-O-(p-toluoyl)uridine
78731-54-1

5-(1-chlorovinyl)-2'-deoxy-3',5'-di-O-(p-toluoyl)uridine

2'-deoxy-5-ethynyl-5'-O-(p-toluoyl)uridine
78731-56-3

2'-deoxy-5-ethynyl-5'-O-(p-toluoyl)uridine

2'-deoxy-5-ethynyluridine
61135-33-9

2'-deoxy-5-ethynyluridine

Conditions
Conditions Yield
With ammonia; In methanol; at 20 ℃; for 48h;
12%
47%

61135-33-9 Upstream products

  • 77875-91-3
    77875-91-3

    5-ethynyltrimethylsilyl-3',5'-di-O-p-toluyl-2'-deoxyuridine

  • 78731-54-1
    78731-54-1

    5-(1-chlorovinyl)-2'-deoxy-3',5'-di-O-(p-toluoyl)uridine

  • 151362-01-5
    151362-01-5

    1-(2-deoxy-β-D-ribofuranosyl)-5-[2-(trimethylsilyl)ethynyl]uracil

  • 54-42-2
    54-42-2

    5-Iodo-2'-deoxyuridine

61135-33-9 Downstream products

  • 596107-17-4
    596107-17-4

    5-[(4-tert-butylphenyl)ethynyl]-2'-deoxyuridine

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